Admiral Yularen's line, "No! Lock them all down, hurry!" is a reference to C-3PO's line, "No! Shut them all down, hurry!" in A New Hope, when R2-D2 is attempting to shut down the trash compactors aboard the Death Star.
After Bane escapes from the Resolute, Anakin angrily holds his arms behind his back, and walks away, much like Darth Vader does at the end of The Empire Strikes Back after the Millennium Falcon escapes.
The holographic mobile hovering over the Gungan toddler's crib includes a colo clawfish and a sando aqua monster, two of the massive underwater beasts that plagued Obi-Wan and Qui-Gon's submarine in Episode I.
